Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
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[Homology]
Score
ADD67981.1PFAM: Lytic transglycosylase catalytic; KEGG: dol:Dole_2185 lytic transglycosylase catalytic. (392 aa)    
Predicted Functional Partners:
ADD67979.1
KEGG: nam:NAMH_0979 putative lipoprotein.
 
     0.866
ADD67980.1
KEGG: wsu:WS1151 hypothetical protein.
       0.788
ADD67982.1
KEGG: tdn:Suden_0394 hypothetical protein.
       0.735
ADD69168.1
KEGG: pca:Pcar_2042 membrane-bound lytic murein transglycosylase D precursor; PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
 
  
 0.559
ADD67983.1
KEGG: noc:Noc_2976 anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Belongs to the anti-sigma-factor antagonist family.
       0.497
ADD68004.1
PFAM: Lytic transglycosylase catalytic; KEGG: bba:Bd2462 soluble lytic murein transglycosylase.
  
     0.478
ADD68524.1
KEGG: tdn:Suden_0734 hypothetical protein.
  
     0.462
ADD67978.1
Hypothetical protein.
       0.406
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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