Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67985.1TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: dde:Dde_2563 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region. (434 aa)    
Predicted Functional Partners:
ADD67203.1
Diguanylate cyclase; SMART: GGDEF domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: cps:CPS_0452 sensory box protein; PFAM: GGDEF domain containing protein.
 
   0.671
ADD68034.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mxa:MXAN_3705 GAF domain/GGDEF domain- containing protein; SMART: GGDEF domain containing protein.
 
   0.671
ADD68583.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mms:mma_0703 diguanylate cyclase; SMART: GGDEF domain containing protein.
  
   0.663
ADD69304.1
Diguanylate cyclase; SMART: GGDEF domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: tdn:Suden_0965 cache sensor signal transduction histidine kinase; PFAM: GGDEF domain containing protein.
  
   0.651
ADD67591.1
Diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; KEGG: dde:Dde_0867 diguanylate cyclase with PAS/PAC sensor; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein.
 
 0.642
ADD68754.1
Diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ppd:Ppro_0085 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein.
 
   0.640
ADD69262.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE4 domain protein; histidine kinase HAMP region domain protein; KEGG: hch:HCH_02106 response regulator; SMART: GGDEF domain containing protein.
 
   
 0.614
ADD68492.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pca:Pcar_2449 GGDEF domain-containing protein; SMART: GGDEF domain containing protein.
  
   0.612
ADD67657.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dat:HRM2_28020 signal transduction family protein (GGDEF domain protein); SMART: GGDEF domain containing protein.
 
   0.601
ADD68793.1
Diguanylate cyclase/phosphodiesterase; KEGG: abu:Abu_0086 EAL/GGDEF domain-containing protein; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein.
 
 
 0.599
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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