STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD68023.1TIGRFAM: probable solute symporter protein; KEGG: gsu:GSU0519 hypothetical protein. (100 aa)    
Predicted Functional Partners:
ADD68022.1
KEGG: gem:GM21_2702 Na+/solute symporter; TIGRFAM: probable sodium symporter protein; PFAM: Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.824
ADD68020.1
KEGG: hha:Hhal_1900 cyclic nucleotide-binding protein; PFAM: protein of unknown function DUF294 nucleotidyltransferase putative; CBS domain containing protein; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; cyclic nucleotide-binding; SMART: CBS domain containing protein.
       0.567
ADD68021.1
Hypothetical protein.
       0.538
ADD68019.1
PFAM: AMP-dependent synthetase and ligase; KEGG: dma:DMR_17770 acetyl-coenzyme A synthetase.
  
    0.466
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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