Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ADD68078.1PFAM: protein of unknown function DUF1239. (179 aa)    
Predicted Functional Partners:
ADD68080.1
KEGG: ypb:YPTS_3711 putative ABC transporter ATP- binding protein YhbG; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.999
ADD68079.1
KEGG: gme:Gmet_1281 OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein.
  
 
 0.993
ADD68077.1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: ppd:Ppro_0970 3-deoxy-D-manno-octulosonate 8- phosphate phosphatase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA.
  
  
 0.922
ADD68081.1
KEGG: bba:Bd0843 RNA polymerase sigma-54 factor; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor.
  
  
 0.859
ADD68273.1
PFAM: permease YjgP/YjgQ family protein; KEGG: geo:Geob_1523 permease YjgP/YjgQ family protein.
  
 
 0.843
ADD68274.1
PFAM: permease YjgP/YjgQ family protein; KEGG: sat:SYN_00415 permease.
  
 
 0.843
hpf
Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
     
 0.822
hprK
HPr kinase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr).
     
 0.798
ADD68090.1
Phosphotransferase system, phosphocarrier protein HPr; KEGG: gme:Gmet_1288 HPrNtr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr.
  
    0.792
ADD68085.1
Conserved hypothetical protein; Displays ATPase and GTPase activities.
       0.790
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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