STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD68080.1KEGG: ypb:YPTS_3711 putative ABC transporter ATP- binding protein YhbG; PFAM: ABC transporter related; SMART: AAA ATPase. (239 aa)    
Predicted Functional Partners:
ADD68078.1
PFAM: protein of unknown function DUF1239.
  
 0.999
ADD68273.1
PFAM: permease YjgP/YjgQ family protein; KEGG: geo:Geob_1523 permease YjgP/YjgQ family protein.
 
 
 0.992
ADD68274.1
PFAM: permease YjgP/YjgQ family protein; KEGG: sat:SYN_00415 permease.
 
 
 0.982
ADD68079.1
KEGG: gme:Gmet_1281 OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein.
  
  
 0.976
ADD67586.1
PFAM: ABC-2 type transporter; KEGG: dal:Dalk_2027 ABC-2 type transporter.
   
  0.934
ADD67587.1
PFAM: ABC-2 type transporter; KEGG: dal:Dalk_2026 ABC-2 type transporter.
   
  0.934
ADD68638.1
PFAM: inner-membrane translocator; KEGG: dma:DMR_11370 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
      0.899
ADD68404.1
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
      0.898
ADD68077.1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: ppd:Ppro_0970 3-deoxy-D-manno-octulosonate 8- phosphate phosphatase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA.
 
  
 0.889
ADD68281.1
PFAM: inner-membrane translocator; KEGG: dat:HRM2_04930 LivM2; Belongs to the binding-protein-dependent transport system permease family.
 
      0.885
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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