STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD68107.1PFAM: outer membrane efflux protein; KEGG: wsu:WS0413 hypothetical protein. (420 aa)    
Predicted Functional Partners:
ADD67033.1
Efflux transporter, RND family, MFP subunit; KEGG: dat:HRM2_15810 RND efflux transporter (HlyD family secretion protein); TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.955
ADD67034.1
KEGG: dat:HRM2_15820 RND efflux pump (AcrB/AcrD/AcrF family protein); TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.940
ADD69147.1
PFAM: outer membrane efflux protein; KEGG: dat:HRM2_47430 putative outer membrane protein.
  
  
 
0.928
ADD67035.1
KEGG: dat:HRM2_15830 RND efflux transporter, outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein.
     
  0.900
ADD67561.1
KEGG: dat:HRM2_00920 putative outer membrane efflux protein (OprM-family protein); TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein.
     
  0.900
ADD69148.1
KEGG: tcx:Tcr_0454 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.778
ADD68247.1
KEGG: pol:Bpro_5559 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; biotin/lipoyl attachment domain-containing protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.721
ADD67522.1
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: tcx:Tcr_0056 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.687
ADD66929.1
KEGG: dps:DP0514 secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein.
  
 
 0.666
ADD67589.1
PFAM: secretion protein HlyD family protein; KEGG: geo:Geob_1779 secretion protein HlyD family protein.
  
 
 0.666
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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