STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD68230.1PFAM: Integrase catalytic region; KEGG: ent:Ent638_4320 integrase catalytic subunit. (260 aa)    
Predicted Functional Partners:
ADD68229.1
PFAM: transposase IS3/IS911 family protein; KEGG: lpp:lpp0199 hypothetical protein.
   
 0.862
ADD68252.1
PFAM: transposase IS3/IS911 family protein; KEGG: lpp:lpp0199 hypothetical protein.
   
 0.660
ADD67417.1
PFAM: transposase IS3/IS911 family protein; KEGG: lpp:lpp0199 hypothetical protein.
   
 0.607
ADD68231.1
KEGG: gsu:GSU0763 helicase, putative.
       0.556
ADD68227.1
Hypothetical protein.
       0.443
ADD68228.1
Hypothetical protein.
       0.443
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.