STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD68237.1KEGG: dal:Dalk_1289 hypothetical protein. (411 aa)    
Predicted Functional Partners:
ADD68232.1
PFAM: N-6 DNA methylase; KEGG: psa:PST_0252 type I restriction-modification system, M subunit.
       0.687
ADD68234.1
PFAM: restriction modification system DNA specificity domain; KEGG: sfr:Sfri_2607 restriction modification system DNA specificity subunit.
       0.687
ADD68235.1
Protein of unknown function DUF450; KEGG: psa:PST_0248 type I restriction-modification system endonuclease; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicase.
       0.687
ADD68233.1
KEGG: dvu:DVU1708 hypothetical protein.
       0.682
ADD68236.1
PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: kpn:KPN_pKPN4p07083 putative transposase.
       0.682
ADD67422.1
KEGG: gur:Gura_4388 helix-turn-helix domain- containing protein; PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; SMART: helix-turn-helix domain protein.
     
 0.512
ADD68231.1
KEGG: gsu:GSU0763 helicase, putative.
       0.462
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.