STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD68268.1PFAM: transposase IS4 family protein; KEGG: dal:Dalk_2298 transposase IS4 family protein. (466 aa)    
Predicted Functional Partners:
ADD67440.1
Hypothetical protein; KEGG: abu:Abu_1714 ATPase, putative.
 
  
 0.585
ADD67372.1
KEGG: gem:GM21_0793 ATP-dependent Lon-type protease- like protein.
  
  
 0.566
ADD67848.1
Superfamily I DNA and RNA helicase and helicase subunits-like protein; KEGG: abu:Abu_1172 putative DNA helicase.
  
    0.557
ADD67680.1
PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; KEGG: pca:Pcar_1454 RNA-binding protein.
  
  
 0.530
ADD68267.1
KEGG: dde:Dde_3508 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein.
       0.513
ADD66957.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: dat:HRM2_45640 hypothetical protein.
  
    0.425
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.