STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD68303.1PFAM: protein of unknown function DUF255; KEGG: nmu:Nmul_A0345 hypothetical protein. (558 aa)    
Predicted Functional Partners:
ADD68951.1
KEGG: mxa:MXAN_1696 Ig-like domain-containing protein.
  
 
 
 0.776
ADD68304.1
KEGG: sfu:Sfum_2664 hypothetical protein.
       0.773
ADD67395.1
Ig family protein; KEGG: cja:CJA_0589 putative Ig domain family; PFAM: Ig family protein; SMART: Dystroglycan-type cadherin domain protein.
    
 
 0.747
ADD67738.1
KEGG: pha:PSHAa2704 hypothetical protein.
    
 
 0.747
ADD69263.1
TIGRFAM: outer membrane adhesin like proteiin; PFAM: von Willebrand factor type A; Hemolysin-type calcium-binding region; KEGG: cja:CJA_1396 putative hemolysin; SMART: von Willebrand factor type A.
    
 
 0.747
ADD68302.1
Hypothetical protein.
       0.697
ADD68305.1
PFAM: cysteine-rich small domain; KEGG: dma:DMR_05450 hypothetical protein.
       0.566
ADD68301.1
KEGG: glo:Glov_0597 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight.
       0.510
ADD68306.1
Transcriptional regulator, BadM/Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: pin:Ping_0631 transcriptional regulator, BadM/Rrf2 family protein.
       0.424
ADD68300.1
PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: geo:Geob_2882 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), phosphate acetyltransferase.
       0.416
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.