STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD68304.1KEGG: sfu:Sfum_2664 hypothetical protein. (231 aa)    
Predicted Functional Partners:
ADD68303.1
PFAM: protein of unknown function DUF255; KEGG: nmu:Nmul_A0345 hypothetical protein.
       0.773
ADD68302.1
Hypothetical protein.
       0.697
ADD68305.1
PFAM: cysteine-rich small domain; KEGG: dma:DMR_05450 hypothetical protein.
 
     0.619
ADD68301.1
KEGG: glo:Glov_0597 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight.
       0.500
ADD68063.1
PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: pca:Pcar_2948 serine endoprotease; SMART: PDZ/DHR/GLGF domain protein.
  
    0.458
ADD68733.1
SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: gme:Gmet_1014 peptidase S1C, Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein.
  
    0.458
ADD68306.1
Transcriptional regulator, BadM/Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: pin:Ping_0631 transcriptional regulator, BadM/Rrf2 family protein.
       0.424
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.