STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD68306.1Transcriptional regulator, BadM/Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: pin:Ping_0631 transcriptional regulator, BadM/Rrf2 family protein. (141 aa)    
Predicted Functional Partners:
ADD68308.1
KEGG: gbm:Gbem_1236 cytochrome c oxidase, cbb3- type, subunit II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome c class I.
  
  
 0.820
ADD68307.1
KEGG: ade:Adeh_1171 cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.795
ADD68309.1
KEGG: acp:A2cp1_1334 hypothetical protein.
       0.663
ADD68015.1
KEGG: afw:Anae109_0637 cysteine desulfurase; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase.
  
  
 0.594
ADD69162.1
KEGG: cysteine desulfurase, mitochondrial precursor; K04487 cysteine desulfurase; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase.
  
  
 0.594
ADD68305.1
PFAM: cysteine-rich small domain; KEGG: dma:DMR_05450 hypothetical protein.
       0.563
ADD68016.1
KEGG: pca:Pcar_1859 NifU-like protein; TIGRFAM: FeS cluster assembly scaffold protein NifU; PFAM: nitrogen-fixing NifU domain protein.
  
  
 0.562
ADD68311.1
KEGG: ank:AnaeK_1234 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
    0.513
ADD68312.1
KEGG: afw:Anae109_1223 hypothetical protein.
       0.499
ADD68310.1
KEGG: afw:Anae109_1221 hypothetical protein.
       0.495
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.