STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD68428.1Hypothetical protein; KEGG: mei:Msip34_0087 general secretion pathway protein H. (334 aa)    
Predicted Functional Partners:
ADD68427.1
PFAM: flagellin domain protein; KEGG: pat:Patl_3088 flagellin-like.
   
   0.790
ADD67282.1
Hypothetical protein; KEGG: pap:PSPA7_2035 general secretion pathway protein J.
  
 
 0.759
ADD67281.1
Hypothetical protein; KEGG: glo:Glov_1274 general secretion pathway protein K.
  
 
 0.731
ADD67137.1
KEGG: nis:NIS_1563 general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase.
  
 
 0.609
ADD67289.1
Type II secretion system protein E; KEGG: cti:RALTA_A2997 general secretory pathway E protein, ATPase component; PFAM: type II secretion system protein E; SMART: AAA ATPase.
  
 
 0.609
ADD67136.1
PFAM: Type II secretion system F domain; KEGG: ilo:IL0371 type II secretory pathway.
  
  
 0.570
ADD67290.1
PFAM: Type II secretion system F domain; KEGG: sdn:Sden_0123 general secretion pathway protein F.
  
  
 0.570
ADD68429.1
KEGG: legume lectin family protein.
      
0.536
ADD69050.1
Peptidase A24A domain protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
  
 0.417
ADD67627.1
KEGG: oan:Oant_3669 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein.
  
  
 0.414
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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