STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD68467.1KEGG: geo:Geob_2932 PhoH family protein; PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc. (467 aa)    
Predicted Functional Partners:
ADD69134.1
TIGRFAM: ribonuclease, Rne/Rng family; KEGG: glo:Glov_0469 ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G.
  
    0.624
ADD68468.1
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: cff:CFF8240_0972 hypothetical protein.
       0.536
ADD68469.1
KEGG: cla:Cla_1046 hypothetical protein.
       0.536
ADD68466.1
KEGG: nam:NAMH_1064 mcp-signal transduction protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer.
       0.512
ADD68465.1
KEGG: tdn:Suden_0210 hypothetical protein.
       0.506
ADD69656.1
PFAM: cytochrome c assembly protein; KEGG: pca:Pcar_3065 cytochrome c biogenesis protein.
  
     0.423
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.