STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD68572.1ABC transporter related protein; KEGG: glo:Glov_1923 cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase. (228 aa)    
Predicted Functional Partners:
ADD68573.1
PFAM: protein of unknown function DUF214; KEGG: gsu:GSU1774 cell division ABC transporter, permease protein FtsX, putative.
 
 
 0.993
ADD68574.1
PFAM: Peptidase M23; KEGG: glo:Glov_1921 peptidase M23.
 
   
 0.877
tsaD
Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
     0.850
ADD68576.1
PFAM: protein of unknown function DUF610 YibQ; KEGG: pca:Pcar_1672 hypothetical protein.
 
     0.811
ADD68575.1
Carboxyl-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: geo:Geob_2654 carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; Belongs to the peptidase S41A family.
       0.783
ADD68578.1
Dihydrouridine synthase DuS; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
       0.783
ADD68571.1
PFAM: Auxin Efflux Carrier; KEGG: gur:Gura_4411 auxin efflux carrier.
       0.773
ADD68340.1
ABC transporter related protein; KEGG: kpu:KP1_5192 nickel transport system ATP- binding component; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     0.648
ADD68570.1
KEGG: cps:CPS_4177 hypothetical protein.
       0.603
ADD68425.1
PFAM: NLP/P60 protein; Sporulation domain protein; KEGG: pca:Pcar_1371 cell wall-associated hydrolase/invasion-associated protein.
  
  
 0.583
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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