STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD68643.1PFAM: lipid A biosynthesis domain protein; KEGG: acp:A2cp1_3503 lipid A biosynthesis domain protein. (215 aa)    
Predicted Functional Partners:
ADD68642.1
PFAM: glycosyl transferase family 39; KEGG: gsu:GSU2555 melittin resistance protein, putative.
     0.984
ADD68644.1
PFAM: glycosyl transferase family 2; KEGG: pca:Pcar_1271 glycosyltransferase.
 
     0.947
ADD67838.1
4-amino-4-deoxy-L-arabinose transferase-like glycosyltransferase of PMT family; KEGG: ank:AnaeK_3438 glycosyl transferase family 39.
 
     0.803
ADD68645.1
KEGG: gsu:GSU0940 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter.
       0.524
ADD68641.1
Phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
       0.512
ADD68640.1
PFAM: amino acid-binding ACT domain protein; KEGG: gsu:GSU1736 ACT domain-containing protein.
       0.502
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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