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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD68728.1PFAM: Protein of unknown function DUF2318, membrane; KEGG: gem:GM21_3166 hypothetical protein. (146 aa)    
Predicted Functional Partners:
ADD68729.1
PFAM: protein of unknown function DUF214; KEGG: dma:DMR_19600 putative ABC transporter permease protein.
 
    0.961
ADD68730.1
KEGG: dma:DMR_19590 putative ABC transporter ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.838
ADD68731.1
KEGG: gur:Gura_3741 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
       0.736
ADD68732.1
Two component, sigma54 specific, transcriptional regulator, Fis family; KEGG: gsu:GSU1320 sigma-54 dependent DNA-binding response regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase.
       0.736
ADD67937.1
PFAM: protein of unknown function DUF214; KEGG: tdn:Suden_1316 hypothetical protein.
 
    0.591
ADD68439.1
PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: wsu:WS0626 sulfur transferase precursor.
  
     0.534
ADD68586.1
KEGG: glo:Glov_0122 4Fe-4S ferredoxin, iron-sulfur binding protein.
  
     0.519
ADD69105.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: glo:Glov_1626 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
     0.449
pheT
KEGG: sat:SYN_01723 phenylalanyl-tRNA synthetase beta chain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit.
       0.432
pheS
TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; KEGG: gem:GM21_2226 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase, class IIc-like; aminoacyl tRNA synthetase class II domain protein; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
       0.419
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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