Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD68729.1PFAM: protein of unknown function DUF214; KEGG: dma:DMR_19600 putative ABC transporter permease protein. (387 aa)    
Predicted Functional Partners:
ADD68730.1
KEGG: dma:DMR_19590 putative ABC transporter ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.973
ADD68728.1
PFAM: Protein of unknown function DUF2318, membrane; KEGG: gem:GM21_3166 hypothetical protein.
 
    0.953
ADD67936.1
KEGG: tdn:Suden_1315 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.840
lolD
ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
 
 
 0.833
ADD68788.1
KEGG: glo:Glov_1037 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 
 0.790
ADD68731.1
KEGG: gur:Gura_3741 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
       0.752
ADD68732.1
Two component, sigma54 specific, transcriptional regulator, Fis family; KEGG: gsu:GSU1320 sigma-54 dependent DNA-binding response regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase.
       0.752
ADD68586.1
KEGG: glo:Glov_0122 4Fe-4S ferredoxin, iron-sulfur binding protein.
  
    0.605
ADD68455.1
Hypothetical protein; KEGG: pfs:PFLU2236 putative ABC transport system, ATP-binding protein.
  
 
 0.599
pheT
KEGG: sat:SYN_01723 phenylalanyl-tRNA synthetase beta chain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit.
     
 0.544
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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