STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD68741.1PFAM: N-6 DNA methylase; KEGG: psa:PST_0252 type I restriction-modification system, M subunit. (639 aa)    
Predicted Functional Partners:
ADD68743.1
PFAM: restriction modification system DNA specificity domain; KEGG: sfr:Sfri_2607 restriction modification system DNA specificity subunit.
 
 0.986
ADD68744.1
Protein of unknown function DUF450; KEGG: psa:PST_0248 type I restriction-modification system endonuclease; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicase.
 
  
 0.975
ADD68234.1
PFAM: restriction modification system DNA specificity domain; KEGG: sfr:Sfri_2607 restriction modification system DNA specificity subunit.
 
 0.942
ADD68235.1
Protein of unknown function DUF450; KEGG: psa:PST_0248 type I restriction-modification system endonuclease; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicase.
 
  
 0.896
ADD68742.1
KEGG: dvu:DVU1708 hypothetical protein.
  
    0.861
ADD68745.1
PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: kpn:KPN_pKPN4p07083 putative transposase.
       0.774
ADD69316.1
PFAM: restriction modification system DNA specificity domain; KEGG: rfr:Rfer_0030 restriction modification system DNA specificity subunit.
  
 
 0.719
ADD69423.1
KEGG: vcj:VCD_003045 hypothetical protein.
  
 
 0.719
ADD68746.1
KEGG: dal:Dalk_1289 hypothetical protein.
       0.687
ADD69319.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
  
 0.557
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.