Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADD68775.1PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: abu:Abu_1136 hypothetical protein. (139 aa)    
Predicted Functional Partners:
ADD68776.1
KEGG: gem:GM21_0424 hypothetical protein.
       0.590
ADD67024.1
PFAM: carbon starvation protein CstA; KEGG: afw:Anae109_4235 carbon starvation protein CstA.
  
    0.540
ADD69579.1
PFAM: Silent information regulator protein Sir2; KEGG: sat:SYN_01020 Sir2 family NAD-dependent deacetylase.
  
    0.518
ADD69641.1
PFAM: Silent information regulator protein Sir2; KEGG: nis:NIS_0515 Sir2 family transcriptional regulator.
  
    0.518
ADD68619.1
PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bpy:Bphyt_6956 D-lactate dehydrogenase (cytochrome).
      
 0.402
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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