STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD68823.1Amidohydrolase; KEGG: dps:DP2857 metal-dependent aminohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. (434 aa)    
Predicted Functional Partners:
ADD68825.1
KEGG: pmr:PMI3675 C4-dicarboxylate transporter; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like; Na+/H+ antiporter NhaC-like; Citrate transporter; TRAP C4- dicarboxylate transport system permease DctM subunit.
 
     0.929
ADD68824.1
TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: ccv:CCV52592_2070 N-carbamoyl-L-amino acid hydrolase (L-carbamoylase); PFAM: peptidase M20; peptidase dimerisation domain protein.
 
   
 0.890
ADD68826.1
KEGG: sfu:Sfum_2438 aspartate ammonia-lyase; TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like.
     
 0.585
ADD69193.1
KEGG: vvy:VV2244 C4-dicarboxylate transporter; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like.
 
     0.531
ADD69192.1
KEGG: vvy:VV2244 C4-dicarboxylate transporter; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit.
 
     0.525
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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