Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD68839.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dds:Ddes_0426 binding-protein-dependent transport systems inner membrane component. (245 aa)    
Predicted Functional Partners:
ADD68838.1
Hypothetical protein; KEGG: nis:NIS_1591 sulfonate/nitrate ABC transporter, substrate-binding protein.
 
 
 0.980
ADD68840.1
ABC transporter related protein; KEGG: pca:Pcar_0855 ABC-type transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.966
ADD68943.1
KEGG: tdn:Suden_1346 putative sulfonate/nitrate transport system substrate-binding protein.
 
 
 0.930
ADD68820.1
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; KEGG: dal:Dalk_0196 extracellular solute-binding protein family 3.
 
 
 0.874
ADD68947.1
TIGRFAM: PAS sensor protein; PFAM: ABC transporter related; Hemerythrin HHE cation binding domain protein; KEGG: dds:Ddes_1165 protein of unknown function DUF438; SMART: AAA ATPase.
  
 
 0.833
ADD68837.1
PFAM: Methyltransferase type 12; Methyltransferase type 11; O-methyltransferase family 2; KEGG: dds:Ddes_0428 methyltransferase type 12.
 
     0.821
ADD68836.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dal:Dalk_0342 TonB-dependent receptor.
 
     0.800
ADD67557.1
Integral membrane sensor signal transduction histidine kinase; KEGG: aha:AHA_2666 GGDEF domain-containing protein; PFAM: NMT1/THI5 like domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
  
 
 0.736
ADD67918.1
KEGG: dds:Ddes_0574 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
  
 
 0.717
ADD68382.1
KEGG: dds:Ddes_0430 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
     0.477
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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