Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
ADD68868.1Transcriptional regulator, GntR family; KEGG: rhi:NGR_b21910 transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH. (242 aa)    
Predicted Functional Partners:
ADD69384.1
GntR domain protein; KEGG: spc:Sputcn32_3384 regulatory protein GntR, HTH; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
  
 0.790
ADD68871.1
PFAM: inner-membrane translocator; KEGG: pfo:Pfl01_2339 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.706
mtnK
5-methylthioribose kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.
     
 0.696
ADD67930.1
KEGG: gem:GM21_2320 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein.
  
  
 0.667
ADD68276.1
Transcriptional regulator, XRE family; KEGG: aha:AHA_0244 DNA-binding protein; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
  
 0.667
ADD68870.1
KEGG: pfo:Pfl01_2338 ABC transporter-like; PFAM: ABC transporter related; SMART: AAA ATPase.
     
 0.659
ADD67019.1
Transcriptional regulator, LacI family; KEGG: oan:Oant_4373 regulatory protein LacI; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI.
  
   
 0.647
ADD68875.1
PFAM: class II aldolase/adducin family protein; KEGG: pca:Pcar_3030 L-fuculose-1-phosphate aldolase.
     
 0.631
ADD68872.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: avi:Avi_5162 ABC transporter binding protein.
  
  
 0.600
mtnA
Translation initiation factor, aIF-2BI family; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
     
 0.593
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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