Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD68900.1PFAM: beta-lactamase domain protein; KEGG: gur:Gura_1594 beta-lactamase domain- containing protein. (309 aa)    
Predicted Functional Partners:
ADD68797.1
KEGG: pca:Pcar_0140 ATP-dependent transcriptional regulator.
  
   
 0.729
ADD68901.1
PFAM: nitroreductase; KEGG: dol:Dole_3049 nitroreductase.
     
 0.687
ADD68902.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dma:DMR_01920 heterodisulfide reductase subunit A.
       0.682
ADD68048.1
KEGG: dma:DMR_38480 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.
    
 
 0.680
ADD67389.1
KEGG: sat:SYN_01886 DNA transfer in the process of conjugation and F pilus assembly protein.
  
     0.574
ADD67359.1
Glutaredoxin 2; KEGG: ppd:Ppro_0197 glutaredoxin 2.
 
 
 
 0.553
ADD69019.1
PFAM: nucleoside recognition domain protein; KEGG: sfu:Sfum_3415 nucleoside recognition domain protein.
  
     0.542
ADD68439.1
PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: wsu:WS0626 sulfur transferase precursor.
  
 
 0.541
ADD67363.1
PFAM: TraH family protein; KEGG: sat:SYN_01874 pilus assembly protein.
  
     0.533
ADD68445.1
PFAM: Flavocytochrome c sulphide dehydrogenase flavin-binding; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; KEGG: dar:Daro_3137 sulfide dehydrogenase (flavocytochrome), flavoprotein subunit.
   
 0.504
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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