STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD68901.1PFAM: nitroreductase; KEGG: dol:Dole_3049 nitroreductase. (172 aa)    
Predicted Functional Partners:
ADD67806.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dat:HRM2_23730 LguL.
 
  
 0.849
ADD68902.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dma:DMR_01920 heterodisulfide reductase subunit A.
       0.773
ADD68900.1
PFAM: beta-lactamase domain protein; KEGG: gur:Gura_1594 beta-lactamase domain- containing protein.
     
 0.687
ADD66971.1
PFAM: ABC-2 type transporter; KEGG: dal:Dalk_3535 ABC-2 type transporter.
  
    0.528
ADD67586.1
PFAM: ABC-2 type transporter; KEGG: dal:Dalk_2027 ABC-2 type transporter.
  
    0.528
ADD67587.1
PFAM: ABC-2 type transporter; KEGG: dal:Dalk_2026 ABC-2 type transporter.
  
    0.528
ADD67597.1
PFAM: ABC-2 type transporter; KEGG: dal:Dalk_3535 ABC-2 type transporter.
  
    0.528
ADD67302.1
PFAM: nitroreductase; KEGG: ppd:Ppro_0326 nitroreductase.
  
     0.511
tadA
CMP/dCMP deaminase zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
  
 0.510
ADD67286.1
PFAM: Abortive infection protein; KEGG: tgr:Tgr7_0273 abortive infection protein.
  
  
 0.497
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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