Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD68910.1KEGG: dat:HRM2_06320 RbsA1; PFAM: ABC transporter related; SMART: AAA ATPase. (502 aa)    
Predicted Functional Partners:
ADD68911.1
PFAM: inner-membrane translocator; KEGG: dat:HRM2_06330 RbsC1; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
ADD68912.1
PFAM: inner-membrane translocator; KEGG: dps:DP0679 sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
ADD68909.1
PFAM: basic membrane lipoprotein; KEGG: dde:Dde_1507 Bmp family membrane protein.
 
 
 0.995
ADD67022.1
PFAM: inner-membrane translocator; KEGG: vha:VIBHAR_06144 ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.918
ADD68913.1
PFAM: phosphoribosyltransferase; KEGG: avn:Avin_47930 xanthine phosphoribosyltransferase.
  
  
 0.821
ADD68914.1
Hypothetical protein.
       0.773
ADD68915.1
PFAM: protein of unknown function DUF340 membrane; KEGG: dde:Dde_2305 hypothetical protein.
       0.773
ADD68638.1
PFAM: inner-membrane translocator; KEGG: dma:DMR_11370 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
      0.681
ADD68871.1
PFAM: inner-membrane translocator; KEGG: pfo:Pfl01_2339 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
     0.471
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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