Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD68911.1PFAM: inner-membrane translocator; KEGG: dat:HRM2_06330 RbsC1; Belongs to the binding-protein-dependent transport system permease family. (352 aa)    
Predicted Functional Partners:
ADD68910.1
KEGG: dat:HRM2_06320 RbsA1; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.999
ADD68912.1
PFAM: inner-membrane translocator; KEGG: dps:DP0679 sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
ADD68909.1
PFAM: basic membrane lipoprotein; KEGG: dde:Dde_1507 Bmp family membrane protein.
 
 
 0.989
ADD68913.1
PFAM: phosphoribosyltransferase; KEGG: avn:Avin_47930 xanthine phosphoribosyltransferase.
       0.816
ADD68914.1
Hypothetical protein.
       0.773
ADD68915.1
PFAM: protein of unknown function DUF340 membrane; KEGG: dde:Dde_2305 hypothetical protein.
       0.773
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
     0.721
ADD68870.1
KEGG: pfo:Pfl01_2338 ABC transporter-like; PFAM: ABC transporter related; SMART: AAA ATPase.
     0.717
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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