Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD68918.1KEGG: mmw:Mmwyl1_3695 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component. (316 aa)    
Predicted Functional Partners:
ADD68917.1
KEGG: gem:GM21_2285 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 0.999
ADD68919.1
KEGG: mmw:Mmwyl1_3696 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor.
 
 0.995
ADD66947.1
TIGRFAM: ectoine/hydroxyectoine ABC transporter, ATP-binding protein; PFAM: ABC transporter related; KEGG: psa:PST_0014 amino acid ABC transporter, ATP- binding protein; SMART: AAA ATPase.
 
 0.987
ADD68461.1
Extracellular solute-binding protein family 3; KEGG: aha:AHA_2800 amino acid ABC transporter, periplasmic amino acid-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor.
 
 0.984
ADD66944.1
TIGRFAM: ectoine/hydroxyectoine ABC transporter solute-binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: pap:PSPA7_4374 ectoine/hydroxyectoine ABC transporter solute-binding protein; SMART: extracellular solute-binding protein family 3.
 
 
 0.734
ADD68920.1
KEGG: dde:Dde_1384 hypothetical protein.
       0.725
lolD
ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
 
 
  
 0.610
metN
ABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
    
 0.544
ADD68916.1
PFAM: Integral membrane protein TerC; KEGG: pmu:PM1066 hypothetical protein.
     
 0.510
ADD66946.1
KEGG: mmw:Mmwyl1_2324 ectoine/hydroxyectoine ABC transporter permease protein EhuD; TIGRFAM: ectoine/hydroxyectoine ABC transporter, permease protein EhuD; polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
  
  
 
0.504
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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