Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD68943.1KEGG: tdn:Suden_1346 putative sulfonate/nitrate transport system substrate-binding protein. (327 aa)    
Predicted Functional Partners:
ADD68942.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ccv:CCV52592_0423 AbcB protein.
 
 
 0.983
ADD68839.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dds:Ddes_0426 binding-protein-dependent transport systems inner membrane component.
 
 
 0.930
ADD68947.1
TIGRFAM: PAS sensor protein; PFAM: ABC transporter related; Hemerythrin HHE cation binding domain protein; KEGG: dds:Ddes_1165 protein of unknown function DUF438; SMART: AAA ATPase.
 
 
 0.860
ADD68840.1
ABC transporter related protein; KEGG: pca:Pcar_0855 ABC-type transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 
 0.711
ADD68944.1
Transcriptional regulator, Crp/Fnr family; KEGG: pca:Pcar_2562 cyclic AMP receptor protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp.
     
 0.593
ADD68941.1
Putative PAS/PAC sensor protein; PFAM: PAS fold-4 domain protein; KEGG: ank:AnaeK_3310 protein of unknown function DUF438.
       0.574
ADD67938.1
KEGG: tdn:Suden_1317 hypothetical protein.
  
     0.560
ADD67719.1
KEGG: cff:CFF8240_0440 nitrous-oxide reductase; PFAM: cytochrome c oxidase subunit II.
  
   
 0.488
ADD67721.1
SMART: Parallel beta-helix repeat; KEGG: cff:CFF8240_0442 nitrous oxidase accessory protein.
  
     0.486
ADD67728.1
KEGG: nis:NIS_1780 ABC transporter, permease.
 
     0.483
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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