STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD68946.1KEGG: tdn:Suden_1345 hypothetical protein. (314 aa)    
Predicted Functional Partners:
ADD68947.1
TIGRFAM: PAS sensor protein; PFAM: ABC transporter related; Hemerythrin HHE cation binding domain protein; KEGG: dds:Ddes_1165 protein of unknown function DUF438; SMART: AAA ATPase.
       0.774
ADD68945.1
PFAM: Domain of unknown function DUF1858; KEGG: sun:SUN_1311 hypothetical protein.
       0.746
ADD68944.1
Transcriptional regulator, Crp/Fnr family; KEGG: pca:Pcar_2562 cyclic AMP receptor protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp.
       0.534
ADD68942.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ccv:CCV52592_0423 AbcB protein.
       0.421
ADD68943.1
KEGG: tdn:Suden_1346 putative sulfonate/nitrate transport system substrate-binding protein.
       0.418
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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