Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD68947.1TIGRFAM: PAS sensor protein; PFAM: ABC transporter related; Hemerythrin HHE cation binding domain protein; KEGG: dds:Ddes_1165 protein of unknown function DUF438; SMART: AAA ATPase. (721 aa)    
Predicted Functional Partners:
ADD68942.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ccv:CCV52592_0423 AbcB protein.
 
 
 0.912
ADD68943.1
KEGG: tdn:Suden_1346 putative sulfonate/nitrate transport system substrate-binding protein.
 
 
 0.860
ADD68839.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dds:Ddes_0426 binding-protein-dependent transport systems inner membrane component.
  
 
 0.833
ADD68946.1
KEGG: tdn:Suden_1345 hypothetical protein.
       0.773
ADD67557.1
Integral membrane sensor signal transduction histidine kinase; KEGG: aha:AHA_2666 GGDEF domain-containing protein; PFAM: NMT1/THI5 like domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
  
 
 0.751
ADD68838.1
Hypothetical protein; KEGG: nis:NIS_1591 sulfonate/nitrate ABC transporter, substrate-binding protein.
 
 
 0.749
ADD68945.1
PFAM: Domain of unknown function DUF1858; KEGG: sun:SUN_1311 hypothetical protein.
       0.746
ADD67918.1
KEGG: dds:Ddes_0574 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
  
 
 0.716
ADD68820.1
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; KEGG: dal:Dalk_0196 extracellular solute-binding protein family 3.
  
 
 0.716
ADD68944.1
Transcriptional regulator, Crp/Fnr family; KEGG: pca:Pcar_2562 cyclic AMP receptor protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp.
     
 0.559
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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