Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD68953.1PFAM: alpha/beta hydrolase fold; KEGG: pat:Patl_0074 alpha/beta hydrolase fold. (285 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.828
ADD68954.1
PFAM: regulatory protein TetR; KEGG: pfo:Pfl01_2955 TetR family transcriptional regulator.
 
   
 0.789
ADD69258.1
PFAM: Ankyrin; KEGG: inversin protein alternative isoform.
  
 0.776
ADD69273.1
Acetyl-CoA acetyltransferase-like protein; KEGG: gem:GM21_0644 thiolase, putative; Belongs to the thiolase-like superfamily. Thiolase family.
 
   
 0.650
msrB
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 
 
 0.648
ADD68768.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hypothetical protein LOC100267823; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.567
ADD68402.1
PFAM: AMP-dependent synthetase and ligase; KEGG: glo:Glov_3416 acyl-CoA synthetase.
 
 
 0.562
ADD66847.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: reh:H16_B0101 short chain dehydrogenase.
 
 0.556
ADD67884.1
8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
  
 
 0.526
bioD
Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
  
  
 0.516
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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