Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADD68981.1PFAM: protein of unknown function DUF935; KEGG: dal:Dalk_3556 phage head morphogenesis protein, SPP1 gp7 family. (368 aa)    
Predicted Functional Partners:
ADD68982.1
KEGG: amc:MADE_00823 phage uncharacterized protein; TIGRFAM: phage uncharacterized protein; PFAM: protein of unknown function DUF264.
 
    0.865
ADD68994.1
KEGG: dal:Dalk_4775 hypothetical protein.
 
    0.814
ADD68983.1
Hypothetical protein; KEGG: ccv:CCV52592_0038 GatB/YqeY family protein.
       0.755
ADD67611.1
TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; KEGG: dal:Dalk_0572 PAS/PAC sensor hybrid histidine kinase; SMART: PAS domain containing protein.
  
     0.661
ADD67569.1
KEGG: gbm:Gbem_1124 cytochrome c family protein; TIGRFAM: cytochrome C family protein; PFAM: doubled CXXCH domain protein.
  
     0.640
ADD68984.1
PFAM: filamentation induced by cAMP protein Fic; KEGG: dps:DP1829 hypothetical protein.
 
     0.568
ADD66812.1
PFAM: Protein of unknown function DUF2232, membrane; KEGG: sfu:Sfum_3186 hypothetical protein.
  
     0.547
ADD68379.1
KEGG: dat:HRM2_20220 hypothetical protein.
 
    0.541
ADD69473.1
Hypothetical protein; KEGG: dvl:Dvul_1151 heat repeat-containing PBS lyase.
  
     0.534
ADD68853.1
Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; KEGG: nis:NIS_0011 transcriptional regulator.
  
     0.520
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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