Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ADD68984.1PFAM: filamentation induced by cAMP protein Fic; KEGG: dps:DP1829 hypothetical protein. (362 aa)    
Predicted Functional Partners:
ADD68985.1
PFAM: ROK family protein; KEGG: mei:Msip34_1274 ROK family protein.
       0.773
ADD69410.1
PFAM: filamentation induced by cAMP protein Fic; KEGG: dol:Dole_0415 filamentation induced by cAMP protein Fic.
  
     0.773
ADD67485.1
Putative transcriptional regulator; PFAM: AAA-4 family protein; KEGG: hso:HS_0100 transcriptional regulator.
 
     0.618
ADD68981.1
PFAM: protein of unknown function DUF935; KEGG: dal:Dalk_3556 phage head morphogenesis protein, SPP1 gp7 family.
 
     0.568
ADD68986.1
Hypothetical protein.
       0.551
ADD68987.1
KEGG: dal:Dalk_0910 DNA repair photolyase-like protein.
       0.551
ADD68982.1
KEGG: amc:MADE_00823 phage uncharacterized protein; TIGRFAM: phage uncharacterized protein; PFAM: protein of unknown function DUF264.
       0.519
ADD68983.1
Hypothetical protein; KEGG: ccv:CCV52592_0038 GatB/YqeY family protein.
       0.519
ADD67426.1
ATPase; KEGG: rbo:A1I_03895 ATPase.
 
     0.509
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
       0.425
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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