Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
ADD68987.1KEGG: dal:Dalk_0910 DNA repair photolyase-like protein. (348 aa)    
Predicted Functional Partners:
ADD68986.1
Hypothetical protein.
       0.817
ADD69167.1
PFAM: glycosyl transferase family 2; KEGG: sfu:Sfum_1811 glycosyl transferase, family 2.
 
     0.666
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
       0.661
ADD68985.1
PFAM: ROK family protein; KEGG: mei:Msip34_1274 ROK family protein.
       0.637
ADD68989.1
Hypothetical protein.
       0.572
ADD68984.1
PFAM: filamentation induced by cAMP protein Fic; KEGG: dps:DP1829 hypothetical protein.
       0.551
ADD68528.1
Hypothetical protein; KEGG: sfu:Sfum_3633 conserved hypothetical GTP- binding protein.
  
     0.508
ADD68982.1
KEGG: amc:MADE_00823 phage uncharacterized protein; TIGRFAM: phage uncharacterized protein; PFAM: protein of unknown function DUF264.
 
     0.454
ADD67765.1
PFAM: Methyltransferase type 11; KEGG: dds:Ddes_0992 methyltransferase type 11.
  
    0.444
ADD69557.1
PFAM: protein of unknown function DUF72; KEGG: apa:APP7_1262 hypothetical protein.
 
     0.429
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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