Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADD68992.1Hypothetical protein; KEGG: mmw:Mmwyl1_4146 peptidase S8 and S53 subtilisin kexin sedolisin. (708 aa)    
Predicted Functional Partners:
ADD68417.1
PFAM: outer membrane porin; KEGG: spc:Sputcn32_3385 outer membrane porin.
  
    0.787
ADD69609.1
KEGG: geo:Geob_2165 PBS lyase heat domain protein repeat-containing protein; PFAM: PBS lyase HEAT domain protein repeat- containing protein; SMART: PBS lyase HEAT domain protein repeat- containing protein.
  
   0.753
ADD67569.1
KEGG: gbm:Gbem_1124 cytochrome c family protein; TIGRFAM: cytochrome C family protein; PFAM: doubled CXXCH domain protein.
  
     0.749
ADD67545.1
KEGG: vfi:VF_A0516 putative lipoprotein.
   
 
 0.745
ADD67611.1
TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; KEGG: dal:Dalk_0572 PAS/PAC sensor hybrid histidine kinase; SMART: PAS domain containing protein.
  
     0.741
ADD69011.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ypy:YPK_0218 hypothetical protein.
  
     0.738
ADD69381.1
PFAM: outer membrane porin; KEGG: spc:Sputcn32_3385 outer membrane porin.
  
    0.738
ADD67126.1
KEGG: dat:HRM2_31460 hypothetical protein.
 
     0.724
ADD69231.1
Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
  
 0.722
ADD67265.1
KEGG: ppr:PBPRA1496 hypothetical trimethylamine N- oxide reductase,cytochrome c-type subunit.
  
     0.720
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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