Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD69031.1PFAM: high-affinity nickel-transporter; KEGG: dde:Dde_0285 ABC-type uncharacterized transport system permease component-like; Belongs to the NiCoT transporter (TC 2.A.52) family. (279 aa)    
Predicted Functional Partners:
ADD69032.1
KEGG: ppd:Ppro_3679 ABC-type uncharacterized transport system periplasmic component-like protein.
 
   
 0.954
ADD69033.1
PFAM: isochorismatase hydrolase; KEGG: glo:Glov_2963 isochorismatase hydrolase.
       0.773
ADD69034.1
KEGG: gsu:GSU0572 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase.
       0.752
ADD67796.1
PFAM: branched-chain amino acid transport; KEGG: atc:AGR_C_2002 hypothetical protein.
  
     0.551
ADD69036.1
PFAM: Queuosine synthesis-like; KEGG: cco:CCC13826_1003 hypothetical protein.
       0.536
mnmA
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
       0.524
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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