Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
ADD69036.1PFAM: Queuosine synthesis-like; KEGG: cco:CCC13826_1003 hypothetical protein. (223 aa)    
Predicted Functional Partners:
ADD69136.1
PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; KEGG: pca:Pcar_2400 NCAIR mutase (PurE)-related proteins.
 
  
 0.954
ADD69465.1
PFAM: protein of unknown function DUF111; KEGG: gsu:GSU0141 hypothetical protein; Belongs to the LarC family.
 
  
 0.923
ADD69202.1
PFAM: Protein of unknown function DUF2088; KEGG: geo:Geob_0833 hypothetical protein.
 
  
 0.921
mnmA
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
     
 0.813
ADD67105.1
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: sfu:Sfum_2752 cobalamin (vitamin B12) biosynthesis CbiM protein.
 
    0.705
ADD68093.1
PFAM: protein of unknown function DUF362; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gsu:GSU0494 iron-sulfur cluster-binding protein.
 
     0.638
ADD68876.1
PFAM: aldo/keto reductase; KEGG: pca:Pcar_1733 aldo/keto reductase family oxidoreductase.
 
    0.571
ADD69628.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dol:Dole_2297 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
    0.560
ADD69034.1
KEGG: gsu:GSU0572 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase.
       0.540
ADD69031.1
PFAM: high-affinity nickel-transporter; KEGG: dde:Dde_0285 ABC-type uncharacterized transport system permease component-like; Belongs to the NiCoT transporter (TC 2.A.52) family.
       0.536
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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