STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD69091.1PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: csa:Csal_2435 outer-membrane lipoprotein carrier protein. (197 aa)    
Predicted Functional Partners:
ADD69587.1
N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; KEGG: dde:Dde_1370 N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin.
    
   0.737
ADD66886.1
KEGG: sfu:Sfum_3743 lipoprotein releasing system, transmembrane protein, LolC/E family; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214.
   
 
 0.681
ADD67937.1
PFAM: protein of unknown function DUF214; KEGG: tdn:Suden_1316 hypothetical protein.
   
 
 0.681
ADD68729.1
PFAM: protein of unknown function DUF214; KEGG: dma:DMR_19600 putative ABC transporter permease protein.
   
 
 0.681
ADD67869.1
KEGG: pca:Pcar_2763 hypothetical protein.
  
     0.652
lolD
ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
   
 
 0.641
ADD67936.1
KEGG: tdn:Suden_1315 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
   
 
 0.641
ADD68730.1
KEGG: dma:DMR_19590 putative ABC transporter ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
   
 
 0.641
ADD68788.1
KEGG: glo:Glov_1037 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
   
 
 0.641
ADD67569.1
KEGG: gbm:Gbem_1124 cytochrome c family protein; TIGRFAM: cytochrome C family protein; PFAM: doubled CXXCH domain protein.
  
     0.608
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.