STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD69198.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_2944 binding-protein-dependent transport systems inner membrane component. (378 aa)    
Predicted Functional Partners:
ADD69199.1
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ecr:ECIAI1_2209 putative transporter subunit: periplasmic-binding component of ABC superfamily.
 
 0.999
ADD69197.1
TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: csa:Csal_2945 ABC transporter related; SMART: AAA ATPase.
 0.998
ADD69196.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_00159 ABC-type proline/glycine betaine transport system, permease component.
 
  
 
0.983
ADD68801.1
TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: sbm:Shew185_2028 glycine betaine/L-proline ABC transporter, ATPase subunit; SMART: AAA ATPase.
  
 0.623
ADD69195.1
Transcriptional regulator, Crp/Fnr family; KEGG: rpa:RPA0673 hydroxybenzoate anaerobic degradation regulatory protein HbaR; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding.
       0.528
ADD69200.1
TIGRFAM: nucleotide sugar dehydrogenase; KEGG: nis:NIS_0741 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase.
       0.473
ADD69201.1
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: hhe:HH0647 nucleotide sugar dehydratase.
       0.463
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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