Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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Textmining
[Homology]
Score
ADD69225.1PFAM: Extracellular ligand-binding receptor; KEGG: geo:Geob_2798 extracellular ligand-binding receptor. (372 aa)    
Predicted Functional Partners:
ADD68638.1
PFAM: inner-membrane translocator; KEGG: dma:DMR_11370 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.899
ADD68639.1
PFAM: inner-membrane translocator; KEGG: sfu:Sfum_4070 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.899
ADD68637.1
KEGG: gsu:GSU1731 branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.862
ADD68281.1
PFAM: inner-membrane translocator; KEGG: dat:HRM2_04930 LivM2; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.856
ADD68280.1
PFAM: inner-membrane translocator; KEGG: dps:DP2489 high-affinity branched-chain amino acid ABC-transporter, permease protein (BraD); Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.842
ADD68282.1
ABC transporter related protein; KEGG: dps:DP2487 high-affinity branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.818
ADD68636.1
KEGG: sfu:Sfum_0383 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.769
ADD67672.1
PFAM: inner-membrane translocator; KEGG: dat:HRM2_02780 LivH1; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.755
ADD67674.1
KEGG: dal:Dalk_4385 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.725
ADD68283.1
ABC transporter related protein; KEGG: dps:DP2486 high-affinity branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.721
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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