Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD69260.1PFAM: methylpurine-DNA glycosylase (MPG); KEGG: psp:PSPPH_4413 3-methyladenine DNA glycosylase; Belongs to the DNA glycosylase MPG family. (218 aa)    
Predicted Functional Partners:
ADD69261.1
KEGG: pin:Ping_3702 Sel1-like repeat-containing serine/threonine protein kinase; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein.
       0.773
ADD69765.1
KEGG: dps:DP1246 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
    
   0.738
ADD69259.1
KEGG: dds:Ddes_0940 protein of unknown function DUF456.
       0.564
ADD67301.1
KEGG: ebr:ECB_01718 exonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase.
    
 0.433
ADD69262.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE4 domain protein; histidine kinase HAMP region domain protein; KEGG: hch:HCH_02106 response regulator; SMART: GGDEF domain containing protein.
       0.423
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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