STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD69358.1PFAM: protein of unknown function DUF833; KEGG: gsu:GSU0792 hypothetical protein. (250 aa)    
Predicted Functional Partners:
ADD69359.1
PFAM: protein of unknown function UPF0029; KEGG: abu:Abu_1834 hypothetical protein.
       0.773
ADD67638.1
PFAM: NUDIX hydrolase; KEGG: gsu:GSU3375 MutT/NUDIX family protein.
 
     0.591
ADD69357.1
KEGG: dat:HRM2_12550 hypothetical protein.
       0.520
ADD69355.1
Carboxynorspermidine decarboxylase; KEGG: sde:Sde_1596 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2.
       0.411
ADD69354.1
PFAM: Saccharopine dehydrogenase; KEGG: dvl:Dvul_2516 saccharopine dehydrogenase.
       0.402
ADD69356.1
Agmatinase; KEGG: dvl:Dvul_2513 putative agmatinase; TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.
       0.402
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.