STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD69405.1Hypothetical protein. (102 aa)    
Predicted Functional Partners:
ADD69404.1
KEGG: sat:SYN_02743 transcriptional regulator.
       0.592
ADD69406.1
Transcriptional regulator, XRE family; KEGG: hap:HAPS_1846 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
       0.492
ADD69407.1
KEGG: glo:Glov_2897 HipA N-terminal domain protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein.
       0.492
ADD69403.1
PFAM: transposase IS3/IS911 family protein; KEGG: bvi:Bcep1808_7228 transposase IS3/IS911 family protein.
       0.423
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.