STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD69439.1KEGG: cjd:JJD26997_1807 HAD superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. (213 aa)    
Predicted Functional Partners:
ADD69443.1
KEGG: cla:Cla_0308 capsular polysaccharide biosynthesis protein, putative nucleotidyltransferase.
    0.991
ADD69440.1
KEGG: cjd:JJD26997_1806 putative nucleotidyltransferase.
    0.988
ADD69441.1
KEGG: cjd:JJD26997_1804 hypothetical protein.
      0.932
ADD69438.1
KEGG: cjd:JJD26997_1808 hypothetical protein.
     
 0.813
ADD69435.1
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: sun:SUN_0324 mannose-1-phosphate guanylyltransferase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein.
       0.793
ADD69448.1
PFAM: NAD-dependent epimerase/dehydratase; dTDP-4- dehydrorhamnose reductase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: tdn:Suden_1703 NAD-dependent epimerase/dehydratase.
 
  
 0.782
ADD69436.1
PFAM: ABC-2 type transporter; KEGG: ppu:PP_1778 lipopolysaccharide ABC export system, permease protein.
       0.776
ADD69437.1
KEGG: psb:Psyr_0918 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.773
ADD69434.1
Phosphomannomutase; KEGG: gbm:Gbem_1134 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II.
   
 
 0.756
ADD69449.1
PFAM: glycosyl transferase group 1; KEGG: sun:SUN_0344 glycosyl transferase.
 
   
 0.740
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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