Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD69457.1Hypothetical protein. (196 aa)    
Predicted Functional Partners:
ADD69458.1
Response regulator receiver protein; KEGG: dal:Dalk_1576 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; SMART: response regulator receiver.
       0.788
ADD69459.1
TIGRFAM: metal dependent phophohydrolase; PFAM: Metal-dependent hydrolase HDOD; metal- dependent phosphohydrolase HD sub domain; KEGG: mms:mma_0564 signal transduction protein; SMART: metal-dependent phosphohydrolase HD region.
       0.784
ADD69460.1
Protein serine/threonine phosphatase; KEGG: pub:SAR11_0064 sigma factor SigB regulation protein; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein.
       0.784
menG
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
       0.777
ADD69462.1
3-polyprenyl-4-hydroxybenzoate decarboxylase-like decarboxylase; KEGG: sfu:Sfum_0287 UbiD family decarboxylases; Belongs to the UbiD family.
       0.768
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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