Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD69580.1PFAM: histidine triad (HIT) protein; KEGG: dde:Dde_1973 HIT family protein. (171 aa)    
Predicted Functional Partners:
ADD69579.1
PFAM: Silent information regulator protein Sir2; KEGG: sat:SYN_01020 Sir2 family NAD-dependent deacetylase.
    
  0.831
ADD69581.1
KEGG: sat:SYN_02932 hypothetical protein.
       0.791
ADD69582.1
N-acetylglucosaminyl transferase-like protein; KEGG: vsa:VSAL_I2224 tetratricopeptide repeat protein.
       0.791
thrS
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
    
 0.736
ADD68451.1
KEGG: gur:Gura_2228 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp.
   
   0.699
groS
Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
  
   0.581
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
     
 0.564
ADD69456.1
PFAM: histidine triad (HIT) protein; KEGG: dvm:DvMF_1561 histidine triad (HIT) protein.
  
     0.557
ADD69584.1
Hypothetical protein.
       0.539
ADD69585.1
PFAM: beta-lactamase domain protein; KEGG: gsu:GSU1631 metallo-beta-lactamase family protein.
       0.539
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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