Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD69582.1N-acetylglucosaminyl transferase-like protein; KEGG: vsa:VSAL_I2224 tetratricopeptide repeat protein. (329 aa)    
Predicted Functional Partners:
ADD69581.1
KEGG: sat:SYN_02932 hypothetical protein.
     
 0.838
lpxC
UDP-3-0-acyl N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.
   
 
 0.823
ADD69579.1
PFAM: Silent information regulator protein Sir2; KEGG: sat:SYN_01020 Sir2 family NAD-dependent deacetylase.
       0.791
ADD69580.1
PFAM: histidine triad (HIT) protein; KEGG: dde:Dde_1973 HIT family protein.
       0.791
ADD69528.1
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
 
     0.672
ADD67001.1
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; Twin-arginine translocation pathway, signal sequence; KEGG: apj:APJL_1705 anaerobic dimethyl sulfoxide reductase chain A precursor.
  
     0.669
ADD66997.1
Trimethylamine-N-oxide reductase (cytochrome c); KEGG: esa:ESA_01919 hypothetical protein; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; Twin-arginine translocation pathway, signal sequence.
  
     0.628
ADD67009.1
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; Twin-arginine translocation pathway, signal sequence; KEGG: elf:LF82_0497 anaerobic dimethyl sulfoxide reductase chain A.
  
     0.613
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
       0.598
ADD67005.1
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; Twin-arginine translocation pathway, signal sequence; KEGG: apj:APJL_1705 anaerobic dimethyl sulfoxide reductase chain A precursor.
  
     0.585
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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