Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADD69649.1PFAM: domain of unknown function DUF1731; NAD- dependent epimerase/dehydratase; KEGG: dal:Dalk_2335 domain of unknown function DUF1731. (462 aa)    
Predicted Functional Partners:
ADD69648.1
KEGG: dat:HRM2_40820 hypothetical protein.
       0.831
ADD68809.1
PFAM: NmrA family protein; NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: dps:DP2578 hypothetical protein.
    0.806
ADD69647.1
KEGG: dde:Dde_3311 ABC-type sugar transport system, periplasmic component.
       0.746
ADD68907.1
ABC-3 protein; KEGG: dat:HRM2_34160 putative ABC-type manganese/zinc transport system, permease component; PFAM: ABC-3 protein; iron dependent repressor; transport system permease protein; SMART: iron dependent repressor.
   
    0.551
ADD67292.1
TIGRFAM: signal peptidase I; KEGG: gsu:GSU1267 signal peptidase I; PFAM: Peptidase S24, S26A and S26B, conserved region; Belongs to the peptidase S26 family.
   
    0.533
ADD67386.1
KEGG: glo:Glov_0308 type IV secretory protease.
   
    0.533
ADD68081.1
KEGG: bba:Bd0843 RNA polymerase sigma-54 factor; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor.
   
    0.531
ADD68002.1
Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake.
   
    0.524
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
    0.522
ADD67923.1
Redoxin domain protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
    0.498
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.