Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADD69721.1PFAM: glycosyl transferase group 1; KEGG: dat:HRM2_01820 putative glycosyl transferase, group 1 family protein. (797 aa)    
Predicted Functional Partners:
ADD69722.1
PFAM: Radical SAM domain protein; KEGG: dal:Dalk_1177 radical SAM domain protein.
 
     0.930
ADD67758.1
KEGG: dat:HRM2_02180 hypothetical 5-AMP-activated protein kinase, beta-1 subunit (AMPK beta-1 chain) (AMPKb).
  
 0.684
ADD67032.1
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: dat:HRM2_15800 putative HTH-type transcriptional regulator.
  
     0.598
ADD68125.1
TIGRFAM: alpha-glucan phosphorylase; KEGG: gsu:GSU0371 carbohydrate phosphorylase family protein; PFAM: glycosyl transferase family 35.
  
 
 0.558
ADD69723.1
KEGG: sfu:Sfum_2734 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.553
ADD69724.1
PFAM: ABC-3 protein; KEGG: cff:CFF8240_1727 cation ABC transporter, permease protein.
       0.553
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
   
 
 0.546
ADD69720.1
KEGG: bba:Bd0347 hypothetical protein.
  
  
 0.522
ADD69435.1
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: sun:SUN_0324 mannose-1-phosphate guanylyltransferase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein.
  
  
 0.483
ADD69540.1
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: tdn:Suden_1734 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-6-phosphate isomerase type II.
  
  
 0.483
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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